Allen Institute

2026–2027 · award

Kinetics of autoreactive B cells during the progression to Rheumatoid Arthritis

Marla Glass · Allen Institute · funded by Arthritis Foundation

149.6k

2025–2030 · grant · Continuing Grant

CRCNS US-German Research Proposal: Computational models of representation and inter-areal communication in mouse visual cortex

Stefan Mihalas · Allen Institute · funded by National Science Foundation

$660k

2025 · fellowship · Klingenstein-Simons Fellowship Awards in Neuroscience

Klingenstein-Simons Fellowship Awards in Neuroscience - Carl Schoonover (2025)

Carl Schoonover · Allen Institute · funded by Esther A. and Joseph Klingenstein Fund

2025–2028 · cooperative agreement · U01

BRAIN CONNECTS: Light microscopy for cell-type specific mesoscale to nanoscale dense connectomics

Nuno Macarico Da Costa · Allen Institute · funded by National Institutes of Health

$2M

2025–2029 · cooperative agreement · U24

BRAIN CONNECTS: An Integrative Connectomics Coordination Center (IC3)

Forrest Christie Collman · Allen Institute · funded by National Institutes of Health

$2.5M

2025–2029 · cooperative agreement · U24

The LS2 initiative: an open-source light-sheet microscope for imaging across scales

Adam K Glaser · Allen Institute · funded by National Institutes of Health

$347.9k

2025–2027 · research · R61

Development of an oligonucleotide therapeutic for Dravet syndrome

Bryan Bentley Gore · Allen Institute · funded by National Institutes of Health

$391.9k

2025–2030 · cooperative agreement · U01

Enhancer AAV toolbox for cell classes and subclasses in the brains of mouse, macaque and marmoset.

Bosiljka Tasic · Allen Institute · funded by National Institutes of Health

$3M

2024–2027 · grant · DP2

Exa-scale tissue readout methods

Adam K Glaser · Allen Institute · funded by National Institutes of Health

$1.3M

2024–2026 · research · R01

Structure-function cell atlas for norepinephrine and serotonin neurons

Jayaram Chandrashekar · Allen Institute · funded by National Institutes of Health

$1.6M

2024–2026 · research · R01

Structure-function cell atlas for norepinephrine and serotonin neurons

Jayaram Chandrashekar · Allen Institute · funded by National Institutes of Health

$1.4M

2023–2025 · cooperative agreement · U24

Scientific and Public Outreach of Cell Type Taxonomies (SPOCTT) Initiative

Kaitlyn Casimo · Allen Institute · funded by National Institutes of Health

$1MCell Image Analysis Techniques

2023–2027 · grant · Standard Grant

Evaluating the impact of an open-data-based lessons and course-based research experiences on student knowledge, skills, and attitudes

Kaitlyn Casimo · Allen Institute · funded by National Science Foundation

$599.5k

2023–2026 · grant · DP2

Measuring input-output operations of cortical neurons with large-scale neurotransmitter imaging

Kaspar Podgorski · Allen Institute · funded by National Institutes of Health

$1.4MEEG and Brain-Computer Interfaces

2023–2026 · cooperative agreement · U01

BRAIN CONNECTS: PatchLink, scalable tools for integrating connectomes, projectomes, and transcriptomes

Tim M Jarsky · Allen Institute · funded by National Institutes of Health

$1.7M

2023–2028 · cooperative agreement · UM1

BRAIN CONNECTS: Center for a pipeline of high throughput integrated volumetric electron microscopy for whole mouse brain connectomics

Forrest Christie Collman · Allen Institute · funded by National Institutes of Health

$6.1MAdvanced Electron Microscopy Techniques and Applications

2023–2027 · cooperative agreement · U01

Neuropixels Opto: Integrated Silicon Probes for Cell-Type-Specific Electrophysiology

Joshua H Siegle · Allen Institute · funded by National Institutes of Health

$2.1MNeuroscience and Neural Engineering

2023–2026 · cooperative agreement · U01

BRAIN CONNECTS: Mapping brain-wide connectivity of neuronal types using barcoded connectomics

Xiaoyin Chen · Allen Institute · funded by National Institutes of Health

$2.2MSingle-cell and spatial transcriptomics

2023–2028 · career development · K00

Interrogating the Fgl2-FcgRIIB axis: A novel mechanism mediating apoptosis of tumor-specific memory CD8+ T cells

Kelsey Bennion · Allen Institute · funded by National Institutes of Health

$90.7kCancer Immunotherapy and Biomarkers

2023–2028 · research · R01

Revealing the transcriptional basis of corticothalamic projections using in situ sequence-based neuroanatomy

Xiaoyin Chen · Allen Institute · funded by National Institutes of Health

$672.8kSingle-cell and spatial transcriptomics

2023–2025 · cooperative agreement · U24

Scientific and Public Outreach of Cell Type Taxonomies (SPOCTT) Initiative

Kaitlyn Casimo · Allen Institute · funded by National Institutes of Health

$1.1MCell Image Analysis Techniques

2023–2026 · cooperative agreement · U01

BRAIN CONNECTS: PatchLink, scalable tools for integrating connectomes, projectomes, and transcriptomes

Tim M Jarsky · Allen Institute · funded by National Institutes of Health

$1.7MSingle-cell and spatial transcriptomics

2023–2027 · cooperative agreement · U01

Neuropixels Opto: Integrated Silicon Probes for Cell-Type-Specific Electrophysiology

Joshua H Siegle · Allen Institute · funded by National Institutes of Health

$2.1MNeuroscience and Neural Engineering

2023–2028 · cooperative agreement · UM1

BRAIN CONNECTS: Center for a pipeline of high throughput integrated volumetric electron microscopy for whole mouse brain connectomics

Forrest Christie Collman · Allen Institute · funded by National Institutes of Health

$5.6M

2023–2024 · research · Accelerating Research on Consciousness

Perturbing the brain to measure distinct conscious states and track cortico-thalamic causal interactions

Irene Rembado · Allen Institute · funded by Templeton World Charity Foundation

$230kPsychedelics and Drug Studies

2023–2026 · cooperative agreement · U01

BRAIN CONNECTS: Mapping brain-wide connectivity of neuronal types using barcoded connectomics

Xiaoyin Chen · Allen Institute · funded by National Institutes of Health

$2.2MSingle-cell and spatial transcriptomics

2023–2027 · cooperative agreement · U01

Neuropixels Opto: Integrated Silicon Probes for Cell-Type-Specific Electrophysiology

Joshua H Siegle · Allen Institute · funded by National Institutes of Health

$2.1M

2023–2028 · research · R01

Revealing the transcriptional basis of corticothalamic projections using in situ sequence-based neuroanatomy

Xiaoyin Chen · Allen Institute · funded by National Institutes of Health

$538.5k

2023–2026 · career development · K00

Interrogating the Fgl2-FcgRIIB axis: A novel mechanism mediating apoptosis of tumor-specific memory CD8+ T cells

Kelsey Bennion · Allen Institute · funded by National Institutes of Health

$50.3k

2023–2027 · cooperative agreement · U01

BRAIN CONNECTS: PatchLink, scalable tools for integrating connectomes, projectomes, and transcriptomes

Tim M Jarsky · Allen Institute · funded by National Institutes of Health

$2.3M

2023–2029 · cooperative agreement · U24

Scientific and Public Outreach on Cell Types and Taxonomies (SPOCTT) 2.0

Kaitlyn Casimo · Allen Institute · funded by National Institutes of Health

$984.2k

2023–2027 · cooperative agreement · U01

BRAIN CONNECTS: Mapping brain-wide connectivity of neuronal types using barcoded connectomics

Xiaoyin Chen · Allen Institute · funded by National Institutes of Health

$2.2M

2023–2028 · cooperative agreement · UM1

BRAIN CONNECTS: Center for a pipeline of high throughput integrated volumetric electron microscopy for whole mouse brain connectomics

Forrest Christie Collman · Allen Institute · funded by National Institutes of Health

$6.6M

2023–2028 · cooperative agreement · UM1

Project-003

Forrest Christie Collman · Allen Institute · funded by National Institutes of Health

2023–2028 · cooperative agreement · UM1

Project-002

Forrest Christie Collman · Allen Institute · funded by National Institutes of Health

2022–2027 · cooperative agreement · U01

Bridging Function, Connectivity, and Transcriptomics of Mouse Cortical Neurons

Anton Arkhipov · Allen Institute · funded by National Institutes of Health

$2.5M

2022–2027 · cooperative agreement · U24

An extensible brain knowledge base and toolset spanning modalities for multi-species data-driven cell types

Satrajit Sujit Ghosh · Allen Institute · funded by National Institutes of Health

$2.1M

2022–2025 · cooperative agreement · UM1

Functionally guided adult whole brain cell atlas in human and NHP

Ed Lein · Allen Institute · funded by National Institutes of Health

$90.2kSingle-cell and spatial transcriptomics

2022–2027 · cooperative agreement · UM1

Functionally guided adult whole brain cell atlas in human and NHP

Ed Lein · Allen Institute · funded by National Institutes of Health

$17.4MSingle-cell and spatial transcriptomics

2022–2027 · cooperative agreement · UM1

Functionally guided adult whole brain cell atlas in human and NHP

Ed Lein · Allen Institute · funded by National Institutes of Health

$22.9MSingle-cell and spatial transcriptomics